KHUPO 12th Annual International Proteomics Conference

March 29 (Thu), 2012

Symposium 1 (09:40 - 10:50) Disease Biomarker

Organizer&Chair: Youngsoo Kim (Seoul Nat'l Univ., Korea), Jae-Pil Jeon (Korea Nat'l Institute of Health, Korea)

(SY-1-1) 09:40-10:05 Antibody-based proteomics in the era of genome re-sequencing
Tesshi Yamada (Rational Cancer Center Research Institute, Japan)
(SY-1-2) 10:05-10:25 Linking Cancer Genome to Proteome: A New NCI Program
Henry Rodriguez (National Cancer Institute, USA)
(SY-1-3) 10:25-10:50 A targeted proteomics-based pipeline for verification of biomarkers in plasma
Jacob Kennedy (Fred Hutchinson Cancer Research Center, USA)

Symposium 2 (11:10 - 12:20) Quantitative Proteomics

Organizer&Chair : Hookeun Lee (Gachon Univ., Korea), Jin Young Kim (Korea Basic Science Institute, Korea)

(SY-2-1) 11:10-11:35 Differential expression profiling of cell surface antigens of CSC-like cells derived from breast cancer cell lines
Eugene C. Yi (Seoul National University, Korea)
(SY-2-2) 11:35-12:00 Sulindac modulates extracellular matrix and cytoskeleton remodelling and membrane proteolytic cleavage in human colorectal cancer cells
David W. Greening (La Trobe University Institute for Molecular Science (LIMS), Australia)
(SY-2-3) 12:00-12:20 Quantitative patterns of the N-terminally variant isoforms of platelet factor-4 in acute myeloid leukemia patients in complete remission
Jin Young Kim (Korea Basic Science Institute, Korea)

[This Session is supported by Korean Bioinformation Center]

Symposium 3 (14:50-16:00) Cancer Proteomics; Joint Symposium with Korean Cancer Association

Organizer&Chair: Hyun Cheol Chung (Yonsei University, Korea)

(SY-3-1) 14:50 - 15:10 Discovery of Class Selective PTP Probes by Large Scale Expression of Human PTPs
Sang Jeon Chung (Korea Research Institute of Bioscience and Biotechnology, Korea)
(SY-3-2) 15:10 - 15:35 Discovery of theragnostic markers in gastric cancer using reverse phase protein lysate array
Jae Ho Cheong (Yonsei University, Korea)
(SY-3-3) 15:35 - 16:00 Biomarkers of Breast Cancer from Proteomic Approach
Dong-Young Noh (Seoul National University, Korea)

[This Session is supported by Bone Metabolism Research Center]

Symposium 4 (17:00-18:30) Antibody Proteomics

Organizer&Chair: Jong-Seo Lee (AbClon, Korea), Sang Won Kang (Ewha Womans Univ, Korea)

(SY-4-1) 17:00-17:30 Contribution of antibody-based profiling to the Human Proteome Project (HPP)
Mathias Uhlen (Royal Institute of Technology (KTH), Sweden)
(SY-4-2) 17:30-18:00 The proteomic way to solving the puzzle of Life
Carl Borrebaeck (Lund University, Sweden)　
(SY-4-3) 18:00-18:15 Epitope mapping as basis for generation of therapeutic antibodies
Johan Rockberg (Royal Institute of Technology (KTH), Sweden)

(SY-4-4) 18:15-18:30 Therapeutic antibody development in the Green Cross
Se-Ho Kim (Green Cross Corp., Korea)

[This Session is supported by Converging Research Headquarter for FMI]

March 30 (Fri), 2012

Symposium 5 (09:40-10:50) Glycoproteomics

Organizer&Chair: Kang-Sik Park (Kyunghee Univ., Korea), Hyun Joo An (Chungnam Nat'l Univ., Korea)

(SY-5-1) 09:40-10:10 Mass spectrometry-based strategies for glycoproteomics and glycopeptidomics
Haojie Lu (Fudan University, China)
(SY-5-2) 10:10-10:30 Ultrasmall gold nanoparticles for highly specific isolation/enrichment of N-linked glycosylated peptides
Hookeun Lee (Gachon University of Medicine and Science, Korea)
(SY-5-3) 10:30-10:50 Modified Glycans on Glycoproteins Modulate Bioactivity
Jae-Min Lim (Changwon National University, Korea)

[This Session is supported by Functional Proteomics Center]

Symposium 6 (11:10-12:20) PTMs and Epigenomics

Organizer&Chair: Kwang Pyo Kim (Konkuk Univ., Korea), Eugene C. Yi (Seoul Nat'l Univ., Korea)

(SY-6-1) 11:10-11:30 REFERENCE-FACILITATED VALIDATION OF PHOSPHOPEPTIDES AND PHOSPHOLIBRARIES
Garry Corthals (University of Turku & Åbo Akademi University, Finland)
(SY-6-2) 11:30-11:50 Analytical considerations and biomedical applications of cell secretome and tyrosine phosphoproteome analyses
Pao-Chi Liao (National Cheng Kung University, Taiwan)
(SY-6-3) 11:50-12:05 Urinary proteome analysis of irritable bowel syndrome (IBS) sub-symptom groups
Young Ah Goo (University of Washington, USA)
(SY-6-4) 12:05-12:20 A protein post-translational modification systems approach to study signaling during myocardial ischemia/reperfusion and cardioprotection: O-linked N-acetylglucosamine, phosphorylation and lysine acetylation
Benjamin Leo Parker (The University of Sydney, Australia)

[This Session is supported by Molecular Inflammation Research Center for Aging Intervention]

Symposium 7 (14:50-16:00) Integrated Omics

Organizer&Chair: Je Kyung Seong (Seoul Nat'l Univ., Korea), Sun Kim (Seoul Nat'l Univ., Korea)

(SY-7-1) 14:50-15:05 Integrated omics approaches for discovery of body fluid-accessible biomarkers for cancer
Jau-Song Yu (Chang Gung University, Taiwan)
(SY-7-2) 15:05-15:25 Chemical proteomics based target identification of bioactive small molecules
Ho Jeong Kwon (Yonsei University, Korea)
(SY-7-3) 15:25-15:40 Bioinformatics toward an understanding of the protein interaction network of the human liver
Dong Li (Beijing Institute of Radiation Medicine, China)
(SY-7-4) 15:40-16:00 CellFinder: An integrated Stem Cell and Developmental Biology platform and data repository
Andreas Kurtz (Seoul National University, Korea)
This Session is supported by Yonsei Biomolecule Research Initiative BK21]

Symposium 8 (17:00-18:10) Chromosome-Centric HPP Initiative

Organizer&Chair: Young-Ki Paik (Yonsei Proteome Research Center, Korea), Jong Shin Yoo (Korea Basic Science Institute, Korea)

(SY-8-1) 17:00-17:10 Introduction of the International Chromosome-Centric Human Proteome Project
Young-Ki Paik (Yonsei Proteome Research Center, Korea)
(SY-8-2) 17:10-17:30 Novel Variants Revealed by Whole Genome and Transcriptome Sequencing of Korean Individuals
Jong-Il Kim (Seoul National University College of Medicine, Korea)
(SY-8-3) 17:30-17:50 A Proteogenomic Study on Cancer
Sanghyuk Lee (The Korean Bioinformation Center, Korea)
(SY-8-4) 17:50-18:10 Progress on the Chromosome 11-Centric Human Proteome Analysis in Human Brain Tissue
Jong Shin Yoo (Korea Basic Science Institute, Korea)

[This Session is supported by Yonsei Proteome Research Center]